Quantitative Health Sciences

Research output

Research output per year 1974 2006 2007 2008 2009 2010 2011 2012 2013 2014 2015 2016 2017 2018 2019 2020 2021 2022 2023 2024

• 18449 Article
• 1753 Review article
• 917 Letter
• 654 Comment/debate
• 1118 More
  • 370 Editorial
  • 330 Conference contribution
  • 209 Chapter
  • 109 Short survey
  • 59 Conference article
  • 33 Paper
  • 5 Book
  • 3 Foreword/postscript

Research output per year

Research output per year

Search results

• 2024

  Dementia Prediction in Older Adults Using Sex-Specific Health Trajectory Clustering

  Ibrahim, O. A., Garg, M., Fu, S., Vassilaki, M., Petersen, R. C., St Sauver, J. & Sohn, S., Jan 25 2024, MEDINFO 2023 - The Future is Accessible: Proceedings of the 19th World Congress on Medical and Health Informatics. Bichel-Findlay, J., Otero, P., Scott, P. & Huesing, E. (eds.). IOS Press BV, p. 850-854 5 p. (Studies in Health Technology and Informatics; vol. 310).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Cluster Analysis 100%
  • Dementia 93%
  • Health 81%
  • Trajectories 77%
  • Delayed Diagnosis 17%
• 2023

  A training program to reduce reader search errors for liver metastasis detection in CT

  Hsieh, S. S., Inoue, A., Yalon, M., Cook, D. A., Fidler, J. L., Gong, H., Sudhir Pillai, P., Vercnocke, A. J., Johnson, M. P., Leng, S., Yu, L., Holmes, D. R., Carter, R. E., McCollough, C. H. & Fletcher, J. G., 2023, Medical Imaging 2023: Image Perception, Observer Performance, and Technology Assessment. Mello-Thoms, C. R. & Chen, Y. (eds.). SPIE, 1246704. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12467).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • metastasis 100%
  • Liver 82%
  • liver 75%
  • education 67%
  • Radiologists 63%

• Augmenting Reddit Posts to Determine Wellness Dimensions impacting Mental Health

  Liyanage, C., Garg, M., Mago, V. & Sohn, S., 2023, BioNLP 2023 - BioNLP and BioNLP-ST, Proceedings of the Workshop. Demner-fushman, D., Ananiadou, S. & Cohen, K. (eds.). Association for Computational Linguistics (ACL), p. 306-312 7 p. (Proceedings of the Annual Meeting of the Association for Computational Linguistics).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Wellness 100%
  • Mental Health 69%
  • Natural language processing systems 62%
  • Health 56%
  • Natural Language Processing (NLP) 54%

• CareD: Caregiver's Experience with Cognitive Decline in Reddit Posts

  Garg, M. & Sohn, S., 2023, Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023. Institute of Electrical and Electronics Engineers Inc., p. 581-587 7 p. (Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Social computing 100%
  • Ethical aspects 87%
  • Large dataset 73%
  • Cognitive Dysfunction 55%
  • Health 49%

• Classification Using Deep Transfer Learning on Structured Healthcare Data

  Farhadi, A., Chen, D., McCoy, R., Scott, C., Ma, P., Vachon, C. M., Zhang, J., Ngufor, C. & Miller, J. A., 2023, 2023 IEEE Symposium Series on Computational Intelligence, SSCI 2023. Institute of Electrical and Electronics Engineers Inc., p. 1560-1565 6 p. (2023 IEEE Symposium Series on Computational Intelligence, SSCI 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transfer Learning 100%
  • Breast Cancer 85%
  • Transfer learning 77%
  • Healthcare 43%
  • Tumor 30%

• Enforcing Explainable Deep Few-Shot Learning to Analyze Plain Knee Radiographs: Data from the Osteoarthritis Initiative

  Littlefield, N., Moradi, H., Amirian, S., Kremers, H. M., Plate, J. F. & Tafti, A. P., 2023, Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023. Institute of Electrical and Electronics Engineers Inc., p. 252-260 9 p. (Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Orthopedics 100%
  • Knee Joint 83%
  • Image analysis 78%
  • Osteoarthritis 73%
  • Deep learning 73%

• Enhanced Shear Wave Velocity Calculation in Glaucoma Patients using Adaptive Singular Value Filter and Deep Neural Network in Ultrasound Elastography

  Bui, N. T., Kazemi, A., Chen, J., Larson, N. B., Sit, A. J. & Zhang, X., 2023, IUS 2023 - IEEE International Ultrasonics Symposium, Proceedings. IEEE Computer Society, (IEEE International Ultrasonics Symposium, IUS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • glaucoma 100%
  • S waves 67%
  • filters 47%
  • cornea 45%
  • decomposition 43%

• Enhancing Patient Care in Rare Genetic Diseases: An HPO-based Phenotyping Pipeline

  Xiao, Y., Enayati, M., Schaeferle, G. M., Lanpher, B. C., Klee, E. W. & Ngufor, C., 2023, Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023. Jiang, X., Wang, H., Alhajj, R., Hu, X., Engel, F., Mahmud, M., Pisanti, N., Cui, X. & Song, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2754-2760 7 p. (Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Ontology 100%
  • Phenotype 89%
  • Rare Diseases 71%
  • Inborn Genetic Diseases 68%
  • Human 66%

• Harnessing Transfer Learning for Dementia Prediction: Leveraging Sex-Different Mild Cognitive Impairment Prognosis

  Liu, Z., Garg, M., Fu, S., Sarkar, S., Vassilaki, M., Petersen, R. C., St. Sauver, J. & Sohn, S., 2023, Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023. Jiang, X., Wang, H., Alhajj, R., Hu, X., Engel, F., Mahmud, M., Pisanti, N., Cui, X. & Song, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 2097-2100 4 p. (Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transfer Learning 100%
  • Dementia 79%
  • Prognosis 74%
  • Transfer learning 63%
  • Machine Learning 60%

• Identifying Major Depressive Disorder From Clinical Notes Using Neural Language Models with Distant Supervision

  Miller, K., Kshatriya, B. S. A., Nunez, N. A., Gardea-Resendez, M., Ryu, E., Coombes, B. J., Fu, S., Frye, M. A., Biernacka, J., Huang, M. & Wang, Y., 2023, Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023. Institute of Electrical and Electronics Engineers Inc., p. 183-192 10 p. (Proceedings - 2023 IEEE 11th International Conference on Healthcare Informatics, ICHI 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Natural Language Processing 100%
  • Major Depressive Disorder 70%
  • Language 53%
  • Machine Learning 25%
  • Semantics 23%

• LoST: A Mental Health Dataset of Low Self-Esteem in Reddit Posts

  Garg, M., Gaur, M., Goswami, R. & Sohn, S., 2023, 2023 IEEE International Conference on Systems, Man, and Cybernetics: Improving the Quality of Life, SMC 2023 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 3854-3859 6 p. (Conference Proceedings - IEEE International Conference on Systems, Man and Cybernetics).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Health 100%
  • Gold 73%
  • Supervised learning 72%
  • Screening 63%

• Machine Learning Models for Prediction of Joint Infections Following Hip Replacement Surgery

  Kremers, H. M., Sohn, S. & Kremers, W. K., 2023, Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023. Jiang, X., Wang, H., Alhajj, R., Hu, X., Engel, F., Mahmud, M., Pisanti, N., Cui, X. & Song, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 3053-3058 6 p. (Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Machine Learning 100%
  • Surgery 97%
  • Replacement 88%
  • Infection 86%
  • Hip 73%

• Navigating Sex-Specific Disease Dynamics in Incident Dementia

  Garg, M., Petersen, R. C., Liu, X., Sauver, J. S., Vassilaki, M. & Sohn, S., 2023, Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023. Jiang, X., Wang, H., Alhajj, R., Hu, X., Engel, F., Mahmud, M., Pisanti, N., Cui, X. & Song, H. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 4065-4072 8 p. (Proceedings - 2023 2023 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2023).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Dementia 100%
  • Health 40%
  • Trajectories 15%
  • Trajectory 13%
  • Disability 12%

• Partially Observable Markov Decision Process Model for Dynamic Human Activity Recognition Using Radio Frequency Signals

  Wang, F., Jones, D., Walker, L., Borah, B. & Salehinejad, H., 2023, 2023 IEEE 19th International Conference on Automation Science and Engineering, CASE 2023. IEEE Computer Society, (IEEE International Conference on Automation Science and Engineering; vol. 2023-August).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Markov processes 100%
  • Machine learning 8%
  • Experiments 4%

• Representing NIH Genetic Test Registry Data in the FHIR Genomic Study Resource

  Khalifa, A. & Freimuth, R. R., Jun 29 2023, Healthcare Transformation with Informatics and Artificial Intelligence. Mantas, J., Gallos, P., Zoulias, E., Hasman, A., Househ, M. S., Charalampidou, M. & Magdalinou, A. (eds.). IOS Press BV, p. 398-401 4 p. (Studies in Health Technology and Informatics; vol. 305).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • National Institutes of Health (U.S.) 100%
  • Genetic Testing 99%
  • Registries 76%
  • Health 70%
  • Testing 49%
• 2022

  A 25-reader performance study for hepatic metastasis detection: lessons from unsupervised learning

  Hsieh, S. S., Inoue, A., Sudhir Pillai, P., Gong, H., Holmes, D. R., Cook, D. A., Leng, S., Yu, L., Carter, R. E., Fletcher, J. G. & McCollough, C. H., 2022, Medical Imaging 2022: Physics of Medical Imaging. Zhao, W. & Yu, L. (eds.). SPIE, 1203116. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12031).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • metastasis 100%
  • Unsupervised learning 78%
  • learning 74%
  • Learning 50%
  • Radiologists 47%

• A Novel Joint Longitudinal Model for Predicting Post-ICU Anemia

  Demuth, G. & Storlie, C., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 489-491 3 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Anemia 100%
  • Intensive Care Unit 88%
  • Hemoglobin 87%
  • Intensive care units 82%
  • Intensive Care Units 51%

• Automated Cobb Angle Measurement in Adolescent Idiopathic Scoliosis: Validation of a Previously-Published Deep Learning Method

  Yan, S., Constant, C., Ramazanian, T., Maradit Kremers, H. & Larson, A. N., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 495-496 2 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Deep Learning 100%
  • Learning Methods 89%
  • Angle measurement 87%
  • Scoliosis 78%
  • Deep learning 64%

• Automated Detection of Type of Scoliosis Surgery from Operative Notes Using Natural Language Processing

  Sagheb, E., Ramazania, T., Larson, N., Sohn, S. & Kremers, H. M., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 497-498 2 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Natural Language Processing 100%
  • Natural Language Processing (NLP) 95%
  • Scoliosis 73%
  • Surgery 68%
  • Curvature 41%

• Bayesian Change Point Detection for Mixed Data with Missing Values

  Murph, A. C. & Storlie, C. B., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 499-501 3 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Missing Values 100%
  • Change Point 92%
  • Longitudinal Data 21%
  • Monitoring 20%
  • Graphical Models 19%

• Biventricular Involvement In Hypertrophic Cardiomyopathy: Preliminary Analysis Of Cardiac MRIs With Visual Right Ventricular Hypertrophy

  Damani, D. N., Kapoor, A., Sivasubramaniam, P., Farahani, N., Enayati, M., Geske, J. B., Ackerman, M. J., Bos, J. M., Pasupathy, K., Araoz, P. A., Arunachalam, S. P. & Arruda-Olson, A. M., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 134-137 4 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hypertrophic Cardiomyopathy 100%
  • Right Ventricular Hypertrophy 61%
  • Magnetic resonance imaging 47%
  • Magnetic resonance 46%
  • Muscle 42%

• DEEP UNSUPERVISED CLUSTERING OF SPARSE ECHO DATA TO IDENTIFY PATIENTS FOR IMPLANTATION OF CARDIOVERTER-DEFIBRILLATOR

  Enayati, M., Farahani, N. Z., Scott, C. G., Bos, J. M., Yao, X., Ngufor, C. G., Ackerman, M. J. & Arruda-Olson, A., 2022, Proceedings of the 2022 Design of Medical Devices Conference, DMD 2022. American Society of Mechanical Engineers, V001T01A008. (Proceedings of the 2022 Design of Medical Devices Conference, DMD 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Defibrillators 100%
  • Hypertrophic Cardiomyopathy 62%
  • Cluster Analysis 58%
  • Deep Learning 15%
  • Heart 14%

• Detection of Dementia Signals from Longitudinal Clinical Visits Using One-Class Classification

  Ibrahim, O. A., Fu, S., Vassilaki, M., Mielke, M. M., Sauver, J. S., Petersen, R. C. & Sohn, S., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 211-216 6 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Dementia 100%
  • Psychological Signal Detection 93%
  • Health 36%
  • Aging of materials 26%
  • Aging Population 19%

• Evaluation of mCODE Coverage in EHR: a Scoping Review of Cancer Natural Language Processing

  Wang, L., Fu, S., Wen, A., Ruan, X., He, H., Liu, S., Moon, S., Mai, M., Riaz, I., Wang, N., Yang, P., Xu, H., Warner, J. L. & Liu, H., 2022, Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022. Institute of Electrical and Electronics Engineers Inc., p. 517-518 2 p. (Proceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Common Data Elements 100%
  • Natural Language Processing 85%
  • Natural Language Processing (NLP) 81%
  • Oncology 77%
  • Electronic Health Record 76%

• Excerno: Filtering Mutations Caused by the Clinical Archival Process in Sequencing Data

  Mitchell, A., Ruiz, M., Yang, S., Wang, C. & Davila, J., 2022, Computational Advances in Bio and Medical Sciences - 11th International Conference, ICCABS 2021, Revised Selected Papers. Bansal, M. S., Măndoiu, I., Rajasekaran, S., Moussa, M., Patterson, M., Skums, P. & Zelikovsky, A. (eds.). Springer Science and Business Media Deutschland GmbH, p. 29-37 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13254 LNBI).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Archives 100%
  • Fixation 89%
  • Formaldehyde 86%
  • Paraffins 80%
  • Mutation 69%

• In-BoXBART: Get Instructions into Biomedical Multi-Task Learning

  Parmar, M., Mishra, S., Luo, M. P. M., Murad, M. H. & Baral, C., 2022, Findings of the Association for Computational Linguistics: NAACL 2022 - Findings. Association for Computational Linguistics (ACL), p. 112-128 17 p. (Findings of the Association for Computational Linguistics: NAACL 2022 - Findings).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Multi-task Learning 100%
  • Multi-task learning 78%
  • Baseline 38%
  • Multitasking 20%
  • Natural language processing systems 17%

• Individualized and Generalized Learner Models for Predicting Missed Hepatic Metastases

  Pillai, P. S., Hsieh, S., Holmes, D., Carter, R., Fletcher, J. G. & McCollough, C., 2022, Medical Imaging 2022: Image Perception, Observer Performance, and Technology Assessment. Mello-Thoms, C. R., Mello-Thoms, C. R. & Taylor-Phillips, S. (eds.). SPIE, 120350C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 12035).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • metastasis 100%
  • Convolutional neural networks 62%
  • Area Under Curve 56%
  • Dose 52%
  • Radiologists 47%

• OpBerg: Discovering Causal Sentences Using Optimal Alignments

  Wood, J., Matiasz, N., Silva, A., Hsu, W., Abyzov, A. & Wang, W., 2022, Big Data Analytics and Knowledge Discovery - 24th International Conference, DaWaK 2022, Proceedings. Wrembel, R., Gamper, J., Kotsis, G., Khalil, I. & Tjoa, A. M. (eds.). Springer Science and Business Media Deutschland GmbH, p. 17-30 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13428 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Alignment 100%
  • Machine learning 63%
  • Machine Learning 27%
  • Speech 16%
  • Experiments 15%

• POKR: Building a Computable Heterogeneous Knowledge Resource for Precision Oncology

  Guo, Y., Wang, C., Moore, R., Liu, H. & Shen, F., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 243-247 5 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Oncology 100%
  • Knowledge Bases 90%
  • Drug Repositioning 34%
  • Genetic Databases 32%
  • Drug Discovery 25%

• Prediction of Incident Dementia Using Patient Temporal Health Status

  Fu, S., Ibrahim, O. A., Wang, Y., Vassilaki, M., Petersen, R. C., Mielke, M. M., St Sauver, J. & Sohn, S., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 757-761 5 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Health Status 100%
  • Dementia 96%
  • Health 84%
  • Medical problems 31%
  • Quality of Life 29%

• The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records

  Fu, S., Wen, A., Pagali, S., Zong, N., St Sauver, J., Sohn, S., Fan, J. & Liu, H., Jun 6 2022, MEDINFO 2021: One World, One Health - Global Partnership for Digital Innovation - Proceedings of the 18th World Congress on Medical and Health Informatics. Otero, P., Scott, P., Martin, S. Z. & Huesing, E. (eds.). IOS Press BV, p. 173-177 5 p. (Studies in Health Technology and Informatics; vol. 290).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Electronic Health Records 100%
  • Health 71%
  • Public Reporting of Healthcare Data 28%
  • Information use 18%
  • Global Health 15%

• Word Embedding Neural Networks to Advance Knee Osteoarthritis Research

  Amirian, S., Ghazaleh, H., Assefi, M., Kremers, H. M., Arabnia, H. R., Plate, J. F. & Tafti, A. P., 2022, Proceedings - 2022 International Conference on Computational Science and Computational Intelligence, CSCI 2022. Institute of Electrical and Electronics Engineers Inc., p. 289-292 4 p. (Proceedings - 2022 International Conference on Computational Science and Computational Intelligence, CSCI 2022).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Osteoarthritis 100%
  • Neural Networks 51%
  • Terminology 47%
  • Neural networks 33%
  • Healthcare 13%
• 2021

  Application of machine learning for detection of hypertrophic cardiomyopathy patients from echocardiogram measurements

  Farahani, N. Z., Enayati, M., Sundaram, D. S. B., Damani, D., Kaggal, V. C., Zacher, A. L., Geske, J. B., Kane, G., Arunachalam, S. P., Pasupathy, K. & Arruda-Olson, A. M., 2021, Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021. American Society of Mechanical Engineers, V001T02A009. (Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Echocardiography 100%
  • Machine learning 50%
  • Information management 32%
  • Imaging techniques 17%
  • Gold 12%

• Early Alert of Elderly Cognitive Impairment using Temporal Streaming Clustering

  Ibrahim, O. A., Fu, S., Vassilaki, M., Petersen, R. C., Mielke, M. M., Sauver, J. S. & Sohn, S., 2021, Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021. Huang, Y., Kurgan, L., Luo, F., Hu, X. T., Chen, Y., Dougherty, E., Kloczkowski, A. & Li, Y. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 905-912 8 p. (Proceedings - 2021 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Impairment 100%
  • Dementia 96%
  • Clustering 88%
  • Cluster Analysis 86%
  • Cognitive Dysfunction 79%

• Incorporating RTLS-Based Spatiotemporal Information in Studying Physical Activities of Clinical Staff

  Enayati, M., Farahani, N. Z., Chaudhry, A. P., Kapoor, A., Arunachalam, S., Walker, L. E., Nestler, D. & Pasupathy, K. S., 2021, 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2021. Institute of Electrical and Electronics Engineers Inc., p. 2386-2391 6 p. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Computer Systems 100%
  • Walking 73%
  • Sedentary Behavior 68%
  • Hospital Emergency Service 67%
  • Exercise 54%

• KELSA: A Knowledge-Enriched Local Sequence Alignment Algorithm for Comparing Patient Medical Records

  Huang, M., Shah, N. D. & Yao, L., 2021, Explainable AI in Healthcare and Medicine - Building a Culture of Transparency and Accountability. Shaban-Nejad, A., Michalowski, M. & Buckeridge, D. L. (eds.). Springer Science and Business Media Deutschland GmbH, p. 227-240 14 p. (Studies in Computational Intelligence; vol. 914).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Health 100%

• Natural language processing based machine learning model using cardiac MRI reports to identify hypertrophic cardiomyopathy patients

  Sundaram, D. S. B., Arunachalam, S. P., Damani, D. N., Farahani, N. Z., Enayati, M., Pasupathy, K. S. & Arruda-Olson, A. M., 2021, Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021. American Society of Mechanical Engineers, V001T03A005. (Proceedings of the 2021 Design of Medical Devices Conference, DMD 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Magnetic resonance imaging 100%
  • Magnetic resonance 99%
  • Machine learning 69%
  • Random forests 50%
  • Magnetic resonance measurement 41%

• Outcomes-Driven Clinical Phenotyping in Cardiogenic Shock using a Mixture of Experts

  Hurley, N. C., Berkowitz, A., Masoudi, F., Ross, J., Desai, N., Shah, N., Dhruva, S. & Mortazavi, B. J., 2021, BHI 2021 - 2021 IEEE EMBS International Conference on Biomedical and Health Informatics, Proceedings. Institute of Electrical and Electronics Engineers Inc., (BHI 2021 - 2021 IEEE EMBS International Conference on Biomedical and Health Informatics, Proceedings).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Cardiogenic Shock 100%
  • Phenotype 76%
  • mortality 71%
  • expert 53%
  • Mortality 53%

• Prototyping CRISP: A causal relation and inference search platform applied to colorectal cancer data

  Budd, S., Blaas, A., Hoarfrost, A., Khezeli, K., D’Silva, K., Soboczenski, F., Mackintosh, G., Chia, N. & Kalantari, J., Mar 9 2021, LifeTech 2021 - 2021 IEEE 3rd Global Conference on Life Sciences and Technologies. Institute of Electrical and Electronics Engineers Inc., p. 517-521 5 p. 9391819. (LifeTech 2021 - 2021 IEEE 3rd Global Conference on Life Sciences and Technologies).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • cancer 100%
  • Colorectal Neoplasms 87%
  • medical research 61%
  • Biomedical Research 55%
  • Oncology 49%

• The Role of Hydrophobicity in Peptide-MHC Binding

  Solanki, A., Riedel, M., Cornette, J., Udell, J., Koratkar, I. & Vasmatzis, G., 2021, Mathematical and Computational Oncology - Third International Symposium, ISMCO 2021, Proceedings. Bebis, G., Gaasterland, T., Kato, M., Kohandel, M. & Wilkie, K. (eds.). Springer Science and Business Media Deutschland GmbH, p. 24-37 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 13060 LNBI).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Hydrophobicity 100%
  • Peptides 83%
  • Neural Networks 31%
  • Software Tools 23%
  • Neural networks 20%
• 2020

  Adaptive gait segmentation algorithm for walking bout detection using tri-axial accelerometers

  O'Callaghan, B. P. F., Doheny, E. P., Goulding, C., Fortune, E. & Lowery, M. M., Jul 2020, 42nd Annual International Conferences of the IEEE Engineering in Medicine and Biology Society: Enabling Innovative Technologies for Global Healthcare, EMBC 2020. Institute of Electrical and Electronics Engineers Inc., p. 4592-4595 4 p. 9176460. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2020-July).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Gait 100%
  • Accelerometers 98%
  • Walking 91%
  • Walking Speed 80%
  • Stop watches 56%

• Assessing induced emotions in employees in a workplace setting using wearable devices

  Fortune, E., Yusuf, Y., Zornes, S., Lopez, J. L. & Blocker, R., 2020, Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020. American Society of Mechanical Engineers (ASME), (Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Wearable technology 100%
  • Electroencephalography 85%
  • Personnel 67%
  • Skin 55%
  • Wearable sensors 15%

• Calibration and Evaluation of a Force Measurement Glove for Field-Based Monitoring of Manual Wheelchair Users

  Anderson, A., Hooke, A. W., Jayaraman, C., Burns, A., Fortune, E., Sosnoff, J. J. & Morrow, M. M., Oct 2020, Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020. Institute of Electrical and Electronics Engineers Inc., p. 1004-1007 4 p. 9288148. (Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Wheelchairs 100%
  • Force measurement 96%
  • Calibration 86%
  • Monitoring 82%
  • Evaluation 58%

• Can real-time location system replace current standard for capture of length of stay?

  Enayati, M., Farahani, N. Z., Nestler, D., Heaton, H. & Pasupathy, K., 2020, Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020. American Society of Mechanical Engineers (ASME), (Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Radio frequency identification (RFID) 100%
  • Data acquisition 89%

• Deep Learning Identification of Asthma Inhaler Techniques in Clinical Notes

  Kshatriya, B. S. A., Sagheb, E., Wi, C. II., Yoon, J., Seol, H. Y., Juhn, Y. & Sohn, S., Dec 16 2020, Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020. Park, T., Cho, Y-R., Hu, X. T., Yoo, I., Woo, H. G., Wang, J., Facelli, J., Nam, S. & Kang, M. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1736-1739 4 p. 9313224. (Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Asthma 100%
  • Deep Learning 92%
  • Nebulizers and Vaporizers 79%
  • Deep learning 59%
  • Supervision 52%

• DeepTKAClassifier: Brand Classification of Total Knee Arthroplasty Implants Using Explainable Deep Convolutional Neural Networks

  Yan, S., Ramazanian, T., Sagheb, E., Fu, S., Sohn, S., Lewallen, D. G., Liu, H., Kremers, W. K., Chaudhary, V., Taunton, M., Kremers, H. M. & Tafti, A. P., 2020, Advances in Visual Computing - 15th International Symposium, ISVC 2020, Proceedings. Bebis, G., Yin, Z., Kim, E., Bender, J., Subr, K., Kwon, B. C., Zhao, J., Kalkofen, D. & Baciu, G. (eds.). Springer Science and Business Media Deutschland GmbH, p. 154-165 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12510 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Implant 100%
  • Arthroplasty 96%
  • Deep neural networks 65%
  • Neural Networks 63%
  • Convolutional neural networks 61%

• Explanatory Analysis of a Machine Learning Model to Identify Hypertrophic Cardiomyopathy Patients from EHR Using Diagnostic Codes

  Farahani, N. Z., Sundaram, D. S. B., Enayati, M., Arunachalam, S. P., Pasupathy, K. & Arruda-Olson, A. M., Dec 16 2020, Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020. Park, T., Cho, Y-R., Hu, X. T., Yoo, I., Woo, H. G., Wang, J., Facelli, J., Nam, S. & Kang, M. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 1932-1937 6 p. 9313231. (Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  Open Access

  • Hypertrophic Cardiomyopathy 100%
  • Learning Model 67%
  • Electronic Health Record 60%
  • Machine Learning 59%
  • Electronic Health Records 46%
  1 Scopus citations

• Measuring Arousal and Emotion in Healthcare Employees Using Novel Devices

  Fortune, E., Yusuf, Y. & Blocker, R., Oct 2020, Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020. Institute of Electrical and Electronics Engineers Inc., p. 835-838 4 p. 9287986. (Proceedings - IEEE 20th International Conference on Bioinformatics and Bioengineering, BIBE 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Emotion 91%
  • Healthcare 81%
  • Facial Expression 79%
  • Arousal 66%
  • Skin 57%

• Patient satisfaction in the emergency department is influenced by total length of stay: A RFID based feasibility study

  Arunachalam, S. P., Albertson, S. M., Sir, M. Y., Nestler, D. M., Heaton, H. A., Marisamy, G. & Pasupathy, K. S., 2020, Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020. American Society of Mechanical Engineers (ASME), (Frontiers in Biomedical Devices, BIOMED - 2020 Design of Medical Devices Conference, DMD 2020).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Radio frequency identification (RFID) 100%
  • Logistic regression 19%
  • Regression analysis 18%
  • Costs 13%

• Rapid amplification of femtograms of DNA with high purity in digital microfluidics for sequencing

  Liu, Y., Jeraldo, P., Mendes-Soares, H., Masters, T., Nelson, H., Patel, R., Chia, N. & Walther-Antonio, M., 2020, MicroTAS 2020 - 24th International Conference on Miniaturized Systems for Chemistry and Life Sciences. Chemical and Biological Microsystems Society, p. 1195-1196 2 p. (MicroTAS 2020 - 24th International Conference on Miniaturized Systems for Chemistry and Life Sciences).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Digital microfluidics 100%
  • Genomics 69%
  • DNA 68%
  • Amplification 67%
  • Sample Preparation 56%