Evaluation of mCODE Coverage in EHR: a Scoping Review of Cancer Natural Language Processing

Liwei Wang, Sunyang Fu, Andrew Wen, Xiaoyang Ruan, Huan He, Sijia Liu, Sungrim Moon, Michelle Mai, Irbaz Riaz, Nan Wang, Ping Yang, Hua Xu, Jeremy L. Warner, Hongfang D Liu

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Studies have shown structured data in Electronic health records (EHRs) alone are not sufficient for cancer research and clinical care. In this review, we aim to assess the coverage of Minimal Common Oncology Data Elements (mCODE) in EHR by elucidating the alignment of NLP extracted data elements with this oncology data standard. We conducted a scoping review based on methods proposed by Arksey and O'Malley. In total 123 publications were selected and included in our analysis. Results show that that some critical data elements covered by mCODE are not fully captured as part of structured EHR data. In addition, cancer research and patient care require some data elements beyond mCODE.

Original languageEnglish (US)
Title of host publicationProceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages517-518
Number of pages2
ISBN (Electronic)9781665468459
DOIs
StatePublished - 2022
Event10th IEEE International Conference on Healthcare Informatics, ICHI 2022 - Rochester, United States
Duration: Jun 11 2022Jun 14 2022

Publication series

NameProceedings - 2022 IEEE 10th International Conference on Healthcare Informatics, ICHI 2022

Conference

Conference10th IEEE International Conference on Healthcare Informatics, ICHI 2022
Country/TerritoryUnited States
CityRochester
Period6/11/226/14/22

Keywords

  • cancer research
  • clinical operation
  • electronic health records
  • Minimal Common Oncology Data Elements (mCODE)
  • natural language processing

ASJC Scopus subject areas

  • Artificial Intelligence
  • Computer Science Applications
  • Information Systems and Management
  • Safety, Risk, Reliability and Quality
  • Health Informatics

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