Experimental and Computational Approaches to Measure Telomere Length: Recent Advances and Future Directions

Research output: Contribution to journalReview articlepeer-review

Abstract

Purpose of Review: The length of telomeres, protective structures at the chromosome ends, is a well-established biomarker for pathological conditions including multisystemic syndromes called telomere biology disorders. Approaches to measure telomere length (TL) differ on whether they estimate average, distribution, or chromosome-specific TL, and each presents their own advantages and limitations. Recent Findings: The development of long-read sequencing and publication of the telomere-to-telomere human genome reference has allowed for scalable and high-resolution TL estimation in pre-existing sequencing datasets but is still impractical as a dedicated TL test. As sequencing costs continue to fall and strategies for selectively enriching telomere regions prior to sequencing improve, these approaches may become a promising alternative to classic methods. Summary: Measurement methods rely on probe hybridization, qPCR or more recently, computational methods using sequencing data. Refinements of existing techniques and new approaches have been recently developed but a test that is accurate, simple, and scalable is still lacking.

Original languageEnglish (US)
Pages (from-to)284-291
Number of pages8
JournalCurrent Hematologic Malignancy Reports
Volume18
Issue number6
DOIs
StatePublished - Dec 2023

Keywords

  • Long read sequencing
  • Optical genome mapping
  • Short read sequencing
  • Single telomere absolute-length rapid assay
  • Telomere
  • Telomere combing assay
  • Telomere restriction fragment

ASJC Scopus subject areas

  • Hematology
  • Oncology
  • Cancer Research

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