TY - GEN
T1 - Electrophysiological Biomarkers of Epileptic Tissue in Human Brain Epilepsy
AU - Lepkova, Kamila
AU - Nejedly, Petr
AU - Sladky, Vladimir
AU - Mivalt, Filip
AU - Krsek, Pavel
AU - Kudr, Martin
AU - Ebel, Matyas
AU - Marusic, Petr
AU - Krysl, David
AU - Kalina, Adam
AU - Janca, Radek
AU - Kremen, Vaclav
AU - Worrell, Gregory A.
N1 - Funding Information:
ACKNOWLEDGMENT The work has been partially supported by the Ministry of Health of the Czech Republic, grant no. NU21J-08-0008 and by the Ministry of Education, Youth, and Sport of the Czech Republic and the Grant Agency of the Czech Technical University in Prague, grant No. SGS21/176/OHK4/3T/17 and by Bioelectronics Neurophysiology and Engineering Laboratory at Mayo Clinic, Rochester, MN.
Publisher Copyright:
© 2022 IEEE.
PY - 2022
Y1 - 2022
N2 - Objective: Localization and mapping of seizure-generating brain tissue, i.e., seizure onset zone (SOZ) is essential to ensure an excellent patient outcome after surgical resection. The clinical approach is to record spontaneous seizures with intracranial EEG (iEEG) and determine SOZ. However, this practice is burdened by inter-patient variability, temporal variability, time-consuming data annotation, and long and variable waiting period for seizures to happen. Approach: Here, we use data from intracranial monitoring of 28 patients with neocortical focal epilepsy. Kurtosis, complexity, activity, mobility, mean, median, min, max, peak to peak, variance, standard deviation, root mean square, and interquartile were extracted as features from the time domain in two frequency bands (12-55 Hz and 55-80 Hz). The features were extracted from segments of inter-ictal iEEG from 8962 channels and tested by Wilcoxon rank sum test with Bonferroni correction of alpha to compare if mean of the feature differs in SOZ versus non-SOZ in each patient individually. Results: From all features, kurtosis, maximum, minimum, peak to peak, standard deviation, root mean square, variance, interquartile shown consistent differences between SOZ and non-SOZ channels across patients (p<0.0004). Conclusion: We analyzed several iEEG time domain features and we found features that significantly differ for data recorded from SOZ channels in most of the dataset with the same trend across patients. Such features can help to automatically differentiate between SOZ and non-SOZ electrodes and a combination of multiple features can yield better classification performance to discover epileptic foci using inter-ictal data without waiting for seizure to be recorded.
AB - Objective: Localization and mapping of seizure-generating brain tissue, i.e., seizure onset zone (SOZ) is essential to ensure an excellent patient outcome after surgical resection. The clinical approach is to record spontaneous seizures with intracranial EEG (iEEG) and determine SOZ. However, this practice is burdened by inter-patient variability, temporal variability, time-consuming data annotation, and long and variable waiting period for seizures to happen. Approach: Here, we use data from intracranial monitoring of 28 patients with neocortical focal epilepsy. Kurtosis, complexity, activity, mobility, mean, median, min, max, peak to peak, variance, standard deviation, root mean square, and interquartile were extracted as features from the time domain in two frequency bands (12-55 Hz and 55-80 Hz). The features were extracted from segments of inter-ictal iEEG from 8962 channels and tested by Wilcoxon rank sum test with Bonferroni correction of alpha to compare if mean of the feature differs in SOZ versus non-SOZ in each patient individually. Results: From all features, kurtosis, maximum, minimum, peak to peak, standard deviation, root mean square, variance, interquartile shown consistent differences between SOZ and non-SOZ channels across patients (p<0.0004). Conclusion: We analyzed several iEEG time domain features and we found features that significantly differ for data recorded from SOZ channels in most of the dataset with the same trend across patients. Such features can help to automatically differentiate between SOZ and non-SOZ electrodes and a combination of multiple features can yield better classification performance to discover epileptic foci using inter-ictal data without waiting for seizure to be recorded.
KW - biomarkers
KW - epilepsy
KW - feature extraction
KW - machine learning
KW - neuroscience
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U2 - 10.1109/EHB55594.2022.9991682
DO - 10.1109/EHB55594.2022.9991682
M3 - Conference contribution
AN - SCOPUS:85146583382
T3 - 2022 10th E-Health and Bioengineering Conference, EHB 2022
BT - 2022 10th E-Health and Bioengineering Conference, EHB 2022
PB - Institute of Electrical and Electronics Engineers Inc.
T2 - 10th E-Health and Bioengineering Conference, EHB 2022
Y2 - 17 November 2022 through 18 November 2022
ER -