TY - JOUR
T1 - Deep Learning-Based Image Classification in Differentiating Tufted Astrocytes, Astrocytic Plaques, and Neuritic Plaques
AU - Koga, Shunsuke
AU - Ghayal, Nikhil B.
AU - Dickson, Dennis W.
N1 - Funding Information:
Dr. Koga receives support from CBD Solutions Research Grant and Betty F. Dyer Foundation Fellowship in progressive supranuclear palsy research. Dr. Dickson receives support from the NIH (P50-NS072187).
Funding Information:
This study is supported by a Karin & Sten Mortstedt CBD Solutions Research Grant, CurePSP, the Rainwater Charitable Trust, and the Jaye F. and Betty F. Dyer Foundation Fellowship in progressive supranuclear palsy research, as well as NINDS Tau Center without Walls (U54-NS100693).
Publisher Copyright:
© 2021 Oxford University Press. All rights reserved.
PY - 2021/4/1
Y1 - 2021/4/1
N2 - This study aimed to develop a deep learning-based image classification model that can differentiate tufted astrocytes (TA), astrocytic plaques (AP), and neuritic plaques (NP) based on images of tissue sections stained with phospho-tau immunohistochemistry. Phosphotau- immunostained slides from the motor cortex were scanned at 20_ magnification. An automated deep learning platform, Google AutoML, was used to create a model for distinguishing TA in progressive supranuclear palsy (PSP) from AP in corticobasal degeneration (CBD) and NP in Alzheimer disease (AD). A total of 1500 images of representative tau lesions were captured from 35 PSP, 27 CBD, and 33 AD patients. Of those, 1332 images were used for training, and 168 images for cross-validation. We tested the model using 100 additional test images taken from 20 patients of each disease. In cross-validation, precision and recall for each individual lesion type were 100% and 98.0% for TA, 98.5% and 98.5% for AP, and 98.0% and 100% for NP, respectively. In a test set, all images of TA and NP were correctly predicted. Only eleven images of AP were predicted to be TA or NP. Our data indicate the potential usefulness of deep learning-based image classification methods to assist in differential diagnosis of tauopathies. VC 2021 American Association of Neuropathologists, Inc. All rights reserved.
AB - This study aimed to develop a deep learning-based image classification model that can differentiate tufted astrocytes (TA), astrocytic plaques (AP), and neuritic plaques (NP) based on images of tissue sections stained with phospho-tau immunohistochemistry. Phosphotau- immunostained slides from the motor cortex were scanned at 20_ magnification. An automated deep learning platform, Google AutoML, was used to create a model for distinguishing TA in progressive supranuclear palsy (PSP) from AP in corticobasal degeneration (CBD) and NP in Alzheimer disease (AD). A total of 1500 images of representative tau lesions were captured from 35 PSP, 27 CBD, and 33 AD patients. Of those, 1332 images were used for training, and 168 images for cross-validation. We tested the model using 100 additional test images taken from 20 patients of each disease. In cross-validation, precision and recall for each individual lesion type were 100% and 98.0% for TA, 98.5% and 98.5% for AP, and 98.0% and 100% for NP, respectively. In a test set, all images of TA and NP were correctly predicted. Only eleven images of AP were predicted to be TA or NP. Our data indicate the potential usefulness of deep learning-based image classification methods to assist in differential diagnosis of tauopathies. VC 2021 American Association of Neuropathologists, Inc. All rights reserved.
KW - Alzheimer disease
KW - Corticobasal degeneration
KW - Deep learning
KW - Machine learning
KW - Progressive supranuclear palsy
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U2 - 10.1093/jnen/nlab005
DO - 10.1093/jnen/nlab005
M3 - Article
C2 - 33570124
AN - SCOPUS:85103474299
SN - 0022-3069
VL - 80
SP - 306
EP - 312
JO - Journal of Neuropathology and Experimental Neurology
JF - Journal of Neuropathology and Experimental Neurology
IS - 4
ER -