TY - JOUR
T1 - Advancing efficacy prediction for electronic health records based emulated trials in repurposing heart failure therapies
AU - Zong, Nansu
AU - Chowdhury, Shaika
AU - Zhou, Shibo
AU - Rajaganapathy, Sivaraman
AU - Yu, Yue
AU - Wang, Liewei
AU - Dai, Qiying
AU - Li, Pengyang
AU - Liu, Xiaoke
AU - Bielinski, Suzette J.
AU - Chen, Jun
AU - Chen, Yongbin
AU - Cerhan, James R.
N1 - Publisher Copyright:
© The Author(s) 2025.
PY - 2025/12
Y1 - 2025/12
N2 - The complexities inherent in EHR data create discrepancies between real-world evidence and RCTs, posing substantial challenges in determining whether a treatment is likely to have a beneficial impact compared to the standard of care in RCTs. The objective of this study is to enhance the prediction of efficacy direction for repurposed drugs tested in RCTs for heart failure (HF). To achieve this, we propose an efficacy direction prediction framework that integrates drug-target predictions with EHR-based Emulation Trials (ET) to derive surrogate endpoints for prediction using HF prognostic markers. Our validation of the proposed novel drug-target prediction model against the BETA benchmark demonstrates superior performance, surpassing existing baseline algorithms. Furthermore, an evaluation of our framework in identifying 17 repurposed drugs—derived from 266 phase 3 HF RCTs—using data from 59,000 patients at the Mayo Clinic highlights its remarkable predictive accuracy.
AB - The complexities inherent in EHR data create discrepancies between real-world evidence and RCTs, posing substantial challenges in determining whether a treatment is likely to have a beneficial impact compared to the standard of care in RCTs. The objective of this study is to enhance the prediction of efficacy direction for repurposed drugs tested in RCTs for heart failure (HF). To achieve this, we propose an efficacy direction prediction framework that integrates drug-target predictions with EHR-based Emulation Trials (ET) to derive surrogate endpoints for prediction using HF prognostic markers. Our validation of the proposed novel drug-target prediction model against the BETA benchmark demonstrates superior performance, surpassing existing baseline algorithms. Furthermore, an evaluation of our framework in identifying 17 repurposed drugs—derived from 266 phase 3 HF RCTs—using data from 59,000 patients at the Mayo Clinic highlights its remarkable predictive accuracy.
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U2 - 10.1038/s41746-025-01705-z
DO - 10.1038/s41746-025-01705-z
M3 - Article
AN - SCOPUS:105005715887
SN - 2398-6352
VL - 8
JO - npj Digital Medicine
JF - npj Digital Medicine
IS - 1
M1 - 306
ER -